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Four chromosomal races (2n=36, 3n=54, 6n=108, 8n=144) and 96 clones have been revealed among 224 specimens of the earthworm Aporrectodea rosea over the territory of Ukraine by means of karyological analysis and biochemical genetic marking. Each population has been showed by several clones at least; moreover the clones from different places have never been identical. The clones in the range of one population can be identified with the set of quantitative and qualitative parameters.
earthworms, genetic structure, polyploid races, morphology
Nowadays scientists are deeply interested with polyploid complexes of wide-spread animal species as most of such complexes became model objects for various experimental studies. Such interest has been caused by the conversion of the typological conception of species into the evolutional one. One of such complexes is the Aporrectodea rosea (Savigny, 1826) species complex that is widely spread in Europe and in particular over the territory of Ukraine.
Karyological studies (
Though the apomictic species may be represented by
heteroploid forms, the one may contain from ten to several hundreds of
clones (genotypes) with one ploidy level that can be revealed by means
of analysis of allozyme variability (
The structure of diploid-polyploid complex based on gene marking of Aporrectodea rosea
was studied for several areas of this prevailing species only. There is
only Fennoscandia in Europe, where the study of genetic structure of Aporrectodea rosea has been carried on (
The materials for the present study were collected in spring - autumn period of 2004 - 2008 using generally accepted procedure (
Localities of Aporrectodea rosea samples in Ukraine. Numbers are given to the most representative samples studied in the centre of country (1 Kiyv, state capital) and in the south (2 Vylkove; Odessa region), east (3 Nizhyn, 4 Novy Bykiv, 5 Serbi; Chernigiv region), west (6 Zhitomir, 7 Romanov; Zhitomir region).
Electrophoretic variability of spectra of enzymes
(aspartate aminotransferase (AST), malate dehydrogenase (MDH),
nonspecific esterases (ES) and superoxide dismutase (SOD) in extracts
from a caudal part of body was investigated by the method of
PAG–electrophoresis in Tris-EDTA-borate buffer system (
Chromosome preparations were made from seminal vesicles following the technique formerly used by the authors in Lumbricidae investigations (
The morphological studies have been started on the alive samples with defining the pigmentation of animal body and clitellum. The further studies have been held on the fixed earthworms when the body length (L) and clitellum (l1), the distance from the frontal part of the body to the clitellum (l2), the maximal diameter of the body out of the clitellum (d) have been measured. We have counted the quantity of segments (n1) and the quantity of segments up to the clitellum (n2), defined the head lobe form, the distance between the setae, the disposition of spinal pores and papilles, the size and position of clitellium, the form and position of pubertate platens by magnifying lens. Then the quantity of segments per 1 mm of body (n1/L), the quantity of segments per 1 mm of body up to the clitellum (n2/l2), the comparative thickness of the body (l2/d) have been measured. Statistical processing of obtained data was carried out by means of a package of applied statistical programs PAST 1.18.
Results and discussion Biochemical gene markingNonspecific esterases. Nonspecific esterases of Aporrectodea rosea are coded by more than four loci. Despite of the very high variability level with the quantity of fractions in one spectrum varying greatly it is difficult to show the proper quantity of loci for even one organism. The analysis of variability of this enzyme’s spectrum proves the clone nature of variability by the fixation of the proper electrophoretic types. This way there the populations of reasonable variability (for example, the sample from O.V. Fomin National Botanical garden, Kyiv (Fig. 2a) with 16 electrophoretic spectra of nonspecific esterases have been found for 94 studied specimens), and populations with each specimen having its own type of the nonspecific esterases (cf. Novyi Bykiv and Galytsya) (Fig. 2b) have been found. We should point out at the fact that specimens with the identical spectra of nonspecific esterases have occured in one sample.
The geographic sample variability of Aporrectodea rosea electrophoretic enzyme spectra: nonspecific esterases (A Kiyv; B Novy Bykiv); aspartate aminotransferase (C Vylkove); malat dehydrogenase (D Serbi); different clones are signed by letters.
Aspartate aminotransferase. It was shown by series of alleles for this species. These series have single (homozygotic) or triple (constant heterozygotic) spectra typical for dimerous protein (Fig. 2c). In the latter case they may have the effect of the gene dose. There have been 6 alleles found. Despite of the lower variability (comparing to the esterases’ one) this enzyme and its coding loci have important diagnostic meaning for the clones’ definition. It’s worth pointing out the cases of finding the organisms with alternative alleles in one sample (Fig. 2c) as this fact reveals their independent origin and the absence of their alliances.
Malate dehydrogenase. This enzyme system is considered more conservative than aspartate aminotranspherase one. However sometimes it also shows the clone characteristics of the organism. Quite often heterozygotes have the asymmetric spectra (Fig. 2d) that points at the effect of the gene dose. There 5 alleles have been found.
Clone structureThe study of all over the territory of Ukraine.
The 96 clones distributed over 60 localities examined have been defined
by means of biochemical gene marking of 224 earthworms that have been
defined as Aporrectodea rosea
due to their morphological features. This way more than half of them
(67 clones) have been individual specimens that was considered to be
normal for highly variable apomictic earthworms (
The average quantity of specimens for one clone has
appeared to be only 2.33 ± 0.10 with the standard dispersion of σ=3.63
for all samples of Aporrectodea rosea.
The correlation of the average quantity and dispersion of this species
proves the tendency of the organisms’ random distribution as to the
clones. Some tendency to the negative binominal distribution must be
caused by the presence of unrandomising samples as the one from the
botanical garden with its high number of organisms in one sample that’s
led to the unproportionally high clone representation of in this area.
The estimation of biodiversity basing the Shannon-Weaver formula has
showed the sample average index of 1.85 for samples of 5 and more
specimens and the one of 5.72 for all the studied earthworms to
characterize the high biodiversity. This fact gives the grounds for
considering this species as so-called hypervariable taxon (
As most of the studied samples of the territory of Ukraine have been not numerous, the further discussion has been based on two most representative samples from Kyiv (site 1) and Vylkove (site 2).
The study of some settlements. The 13 clones have been defined by means of biochemical gene marking of 90 specimens of the Aporrectodea rosea population of Kiyv of the spring-autumn period 2006 (Fig. 1, Table 1). It appears to be 6.9 ± 0.27 specimens per clone. Among them 6 (46%) clones have been shown to be individual specimens and 3 of them (23%) have had only two specimens. These way 4 dominant clones have got only 31% of their general quantity. Besides as to the quantity of organisms (78) they get up to 86.6% of the sample. The quantity of the found organisms varies from 5 (Aporrectodea rosea-C) to 30 (Aporrectodea rosea-B) in these clones’ measures. The distribution of these clones according to the quantity of specimens appears to correlate the distribution of rare events (Puasson distribution) that corresponds to stochastic laws. The close indexes of average (M=6.9) and standard dispersion (σ=7.78) point out at the same fact.
Genetic structure of Aporrectodea rosea clones.
Kyiv | Vylkove | ||||||||
---|---|---|---|---|---|---|---|---|---|
Clone | ES | AST | MDH | n | Clone | ES | AST | MDH | n |
A | a | b | c | 29 | A | a | b | a | 13 |
B | b | a | a | 30 | C | b | c | a | 9 |
B’ | b’ | a | b | 2 | A’’ | a | b | b | 4 |
C | i | a | a | 5 | A’ | b | b | d | 1 |
D | j | a’ | a | 14 | A’’’ | e | b | a | 1 |
D’’ | d | a’ | a | 2 | A’’’’ | e | e | ? | 1 |
E | d | b | a’ | 1 | C’’ | a | c | a | 1 |
F | e | c | b | 1 | C’’’ | e | c | a | 1 |
G | f | c | b | 1 | E | c | a | a | 1 |
H | e | d | a | 1 | D’ | d | b | a | 1 |
I | c | a | a | 2 | F | t | b | a | 1 |
K | h | a | a | 1 | B | c | d | c | 1 |
L | i | e | c | 1 | D | a | a | ? | 1 |
We have been able to observe the sudden changes in the clones structure of the different season samples (Table 2). This way it has been not only the rare clone structure that changes but the dominant one does as well (Fig. 3).
The representation of Aporrectodea rosea clones in the season samples from Kiyv.
Period of the specimens collecting | clones | n |
---|---|---|
June-July 2005 | A, B, C, D’ | 9 |
August 2005 | A | 10 |
May-June 2006 | A, B, D’ | 13 |
July 2006 | A, B, I, J, K | 29 |
September 2006 | B, B’, C, D | 25 |
October 2006 | D | 3 |
The 13 clones have been defined by means of biochemical gene marking of 36 specimens of the Aporrectodea rosea population of Vylkove of the spring-autumn period of 2006 (Fig. 1, Table 1). It appeares to be 2.8 per clone. Among them 10 (76.9%) clones have been shown to be individual specimens and 3 dominant clones get 23.1% of their general quantity. Besides as to the quantity of organisms (26) they get up to 72.2% of the sample. The quantity of the found organisms varies from 4 (Aporrectodea rosea-C) to 13 (Aporrectodea rosea-B) in these clones’ measures. The distribution of these clones according to the quantity of specimens appears to correlate the Puasson distribution. The close indexes of average (2.76) and standard dispersion (3.83) point out at the same fact.
Karyological analysis. The specimens that could be used for karyological analysis have been obtained of only five Aporrectodea rosea samples which, however, represent 4 different regions in the centre, east, west and south of Ukraine (Table 3). In the Kiyv sample, 33 mitotic metaphases of Aporrectodea rosea11 specimens were studied. We have also showed the Aporrectodea rosea-A clone being characterized by triploid number of chromosomes 3n=34, NF=108 by analyzing five specimens. We have got 6 metaphase plates of two specimens of Aporrectodea rosea-B clone with diploid number of chromososmes (2n=36, NF=72). This clone must be represented by diploid race. The clone Aporrectodea rosea-C has been characterized by hexaploid number of chromosomes 6n=108, NF=216 (Fig. 4). The specimens of Aporrectodea rosea-D clone has been characterized by octaploid number of chromosomes (8n=144). The chromosomes of the triploid race have been typically smaller than the ones of the diploid race.
The seasonal variability of nonspecific esterases and clonal diversity of the Aporrectodea rosea populations from the Kiyv sample: a June b October.
The hexaploid chromosome set (6n=108) of the clone Aporrectodea rosea-C from Kiyv: A mitotic metaphase B karyogram.
In the Vylkove sample, we have got 20 mitotic metaphases of the five specimens of the most spread clone A. The organisms of this clone have been found to have triploid number of chromosomes:3n=54, NF=108.
We have showed the triploid number of chromosomes 3n=54, NF=108 for samples from other regions, too. Eight specimens of Nizhyn sample, six specimens from Zhitomir and four from Romanov all were triploid and, above, one organism with hexaploid chromosome number have been found.
Thus, the series of heteroploid Aporrectodea rosea clones from different places of Ukraine were found by means of karyological analysis (Table 3). With all this going on dominant number of chromosomes is shown to be triploid considered its being the most spread over the territory of Ukraine (Viktorov 1993).
Karyotypes ofAporrectodea rosea from Ukraine and their belonging to clones.
Sample (site on the map) | Clone | Karyotype | The quantity of plates | The quantity of specimens |
---|---|---|---|---|
Kiyv (1) | A | 3n = 54 | 23 | 5 |
B | 2n = 36 | 6 | 2 | |
C | 6n = 108 | 8 | 3 | |
D | 8n = 144 | 4 | 2 | |
Vylkove (2) | A | 3n = 54 | 20 | 5 |
Nizhyn (3) | A | 3n = 54 | 23 | 8 |
Zhitomir (6) | A | 3n = 54 | 12 | 6 |
Romanov (7) | A | 3n = 54 | 17 | 4 |
B | 6n = 108 | 2 | 1 |
The analysis of morphological features of different clones representatives. We have used the wide-spreadAporrectodea rosea clones of earthworms from Kyiv and Vylkove for morphological analyses. We should point out that the analysis of different clones of the same residence let’s avoiding the environmental effect that anyway leads to modificating the morphological appearance of earthworms in samples from different regions.
Kiyv.Average values of investigated parameters of four Aporrectodea rosea wide-spread clones (A, B, C, D) are given in Table 4. As for the results of dispersive analysis (LSD–test), Aporrectodea rosea-A clones (basing the absolute (D) and comparative (l2/D) body diameter) and Aporrectodea rosea-B clones (basing comparative body diameter) are well-differentiated ones for the morphological features, while no reliable difference between Aporrectodea rosea-C and Aporrectodea rosea-D clones have been found. The qualitative parameters also allow the reliable differentiating of most of clones (Table 5).
Average (M) and standard errors (m) of morphological parameters of Aporrectodea rosea clones. L - length of whole body, l1- clitellum, l2- forward end of body, D - maximal diameter of a body behind clittelum, n1 - total number of segments, n2 - number of segments up to clitellum.
Parameters | Clone /Number of specimens | |||||||
---|---|---|---|---|---|---|---|---|
Kiyv | Vylkove | |||||||
A(29) | B(30) | C(5) | D(14) | A(13) | C(4) | A’’(9) | ||
L, MM | M | 27, 14 | 31 | 31, 6 | 29, 36 | 30, 62 | 30, 5 | 29, 67 |
m | 1, 26 | 0, 88 | 1, 12 | 1, 09 | 1, 49 | 1, 04 | 2, 86 | |
n1 | M | 96, 14 | 110, 03 | 110, 2 | 104, 86 | 109, 23 | 107, 25 | 100, 44 |
m | 3, 52 | 2, 39 | 3, 32 | 2, 39 | 4, 95 | 5, 3 | 10, 02 | |
n1/L | M | 3, 6 | 3, 58 | 3, 49 | 3, 61 | 2, 88 | 3, 13 | 2, 56 |
m | 0, 06 | 0, 05 | 0, 02 | 0, 08 | 0, 23 | 0, 13 | 0, 23 | |
n2/l2 | M | 2, 86 | 2, 85 | 2, 87 | 2, 98 | 7, 5 | 7, 25 | 7, 72 |
m | 0, 03 | 0, 08 | 0, 08 | 0, 05 | 0, 27 | 0, 25 | 0, 25 | |
l2, mm | M | 8, 19 | 8, 85 | 8, 4 | 8, 43 | 3, 06 | 2, 88 | 2, 64 |
m | 0, 05 | 0, 32 | 0, 24 | 0, 14 | 0, 13 | 0, 13 | 0, 13 | |
l1, mm | M | 3, 28 | 3, 09 | 3 | 2, 93 | 2, 47 | 2, 53 | 2, 96 |
m | 0, 09 | 0, 13 | 0, 32 | 0, 22 | 0, 07 | 0, 12 | 0, 13 | |
D, mm | M | 2, 15 | 1, 92 | 1, 7 | 1, 71 | 3, 6 | 3, 53 | 3, 38 |
m | 0, 06 | 0, 04 | 0, 12 | 0, 07 | 0, 14 | 0, 21 | 0, 05 | |
l2 /D | M | 3, 89 | 4, 48 | 5 | 4, 97 | 3, 3 | 3, 41 | 3, 09 |
m | 0, 06 | 0, 11 | 0, 2 | 0, 11 | 0, 12 | 0, 1 | 0, 11 |
Frequencies (%) of qualitative parameters ofAporrectodea rosea.
Features | Variantsof parameters | Kiyv | Vylkove | |||||
---|---|---|---|---|---|---|---|---|
A | B | C | D | A | C | A’’ | ||
n= 29 | n= 30 | n= 5 | n= 14 | N=13 | N=4 | N=9 | ||
Beginningof clitellum(segments) | 24 | 0 | 0 | 0 | 0 | 15.4 | 0 | 22.2 |
25 | 100 | 100 | 100 | 0 | 15.4 | 25 | 77.8 | |
26 | 0 | 0 | 0 | 100 | 69.2 | 75 | 0 | |
Endingof clitellum(segments) | 31 | 3.5 | 0 | 0 | 0 | 7.7 | 0 | 0 |
32 | 96.6 | 100 | 100 | 100 | 15.4 | 100 | 100 | |
33 | 0 | 0 | 0 | 0 | 76.9 | 0 | 0 | |
Pigmentationof body | Unpigmented | 0 | 0 | 0 | 0 | 100 | 100 | 66.7 |
Light pink | 100 | 100 | 100 | 100 | 0 | 0 | 33.3 | |
Pigmentationof clitellum | Deep orange | 96.6 | 0 | 0 | 100 | 100 | 0 | 0 |
Light orange | 0 | 100 | 0 | 0 | 0 | 0 | 22.2 | |
Pink and white | 0 | 0 | 0 | 0 | 0 | 100 | 55.6 | |
Unpigmented | 0 | 0 | 100 | 0 | 0 | 0 | 22.2 | |
Red | 3.5 | 0 | 0 | 0 | 0 | 0 | 0 |
The discriminant analysis of the features’ parameters has showed the studied clones to be discriminated better within the qualitative features but for the quantitative ones (97.44 and 61.54% respectively). Considering all the features even leads to some lowering of the discrimination accuracy (96.15%) comparing to the one based on the qualitative parameters.
The dispersion diagram (Fig. 5, a) shows only Aporrectodea rosea-D standing out for the first discriminant function. Aporrectodea rosea-A, Aporrectodea rosea-Band Aporrectodea rosea-C are differed with the second discriminant function. The using of other pairs of discriminant functions has given the same results.
The distribution of the studiedAporrectodea rosea samples in the zone of discriminant functions: a Kiyv (north) b Vylkove (south).
Vylkove.We have used three most wide-spread clones(A, A’’, C) for morphological analysis.Average values of their investigated parameters are given in Table 4. The dispersive analysis (LSD–test) has showed the presence of their possible distinctions with some features. For example the Aporrectodea rosea-A – A. rosea-A’’ clone pair differ significally with the absolute (D) and relative (l2/ D) diameter of the body, though Aporrectodea rosea-C - A. rosea- A’’ does only with the relative one. Besides, the clones used for the analysis are reliably differentiated within the number of qualitative features (Table 5).
The discriminant analysis has showed all the studied clones to be discriminated well (100%) basing the set of features. The clone Aporrectodea rosea-A stands out well with the first discriminant function (Fig. 5, b). Aporrectodea rosea-A’’ and Aporrectodea rosea-C are differed with the second discriminant function. Thus all three dominant clones are districted from each other rather well.
ConclusionsThe incredibly high variability of Aporrectodea rosea
clones has been found out (96 clones per 224 studied specimens from 60
localities) in our study. As a rule, several clones have been studied
in the range of one population and the clones of different places have
never been identical ones. We have expected for such results basing the
Fennoscandian data (
Such a high level of genetic variability of this species must be induced by the high genome mutability that must be caused the recombination of the genetic material that has led to forming of not only lot of genetic form but the heteroploid races as well. For example di- (2n=36), tri- (3n=54), hexa- (6n=108) and octaploid (8n=144) Aporrectodea rosea specimens have been found on the studied territory. This way the triploids appear to be the most wide-spread ones and get nearly 73% of the general quantity of the studied specimens. The significant heterogeneity of this species distinctly correlates the high clone variability. We have managed to define the set of features for the clones’ identification in the range of one population. They are districted typically better with their qualitative features than with the linear parameters ones. Besides, the clone structure ofAporrectodea rosea population is characterized by distinct season variability that proves the ecological differentiation of clones. Further sampling is needed, however, to support the preliminary observations presented here.