Research Article |
Corresponding author: Robert P. Wagensommer ( robert.wagensommer@uniba.it ) Academic editor: Viktoria Shneyer
© 2021 Alessio Turco, Antonella Albano, Pietro Medagli, Robert P. Wagensommer, Saverio D'Emerico.
This is an open access article distributed under the terms of the Creative Commons Attribution License (CC BY 4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
Citation:
Turco A, Albano A, Medagli P, Wagensommer RP, D'Emerico S (2021) Comparative chromosome studies in species of subtribe Orchidinae (Orchidaceae). Comparative Cytogenetics 15(4): 507-525. https://doi.org/10.3897/compcytogen.v15.i4.75990
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In our study, FISH mapping using 18S-5.8S-25S rDNA and 5S rDNA sequences was performed for the first time on Ophrys tenthredinifera Willdenow, 1805, Serapias vomeracea (Burman f., 1770) Briquet, 1910 and Himantoglossum hircinum (Linnaeus, 1753) Sprengel, 1826. A detailed study was also performed on O. tenthredinifera using Giemsa-staining, silver-staining, CMA fluorescence banding and fluorescence in situ hybridisation (FISH) with rDNA probes. We analysed two subspecies, i.e. O. tenthredinifera subsp. neglecta (Parlatore, 1860) E.G. Camus, 1908 and O. tenthredinifera subsp. grandiflora (Tenore, 1819) Kreutz, 2004 by the traditional Feulgen method and constructed the karyotype. The cytotaxonomic implications for both taxa are also discussed. In Himantoglossum hircinum, FISH and silver staining highlighted differences in the number of two rDNA families (35S and 5S) with respect to Barlia robertiana (Loiseleur-Deslongchamps, 1807) Greuter, 1967. In addition, fluorescence in situ hybridisation was also applied to diploid (2n = 2x = 36) and triploid (2n = 3x = 54) Anacamptis morio (Linnaeus, 1753) R.M. Bateman, Pridgeon et M.W. Chase, 1997. As far as we are aware, this is the first case of autotriploidy observed in A. morio.
Anacamptis, C-banding, Cytotaxonomy, FISH, Himantoglossum, Karyotype, Ophrys, Serapias
Over the years, various karyological aspects including ploidy level, total length of the chromosome set, symmetry indices and amount of nuclear DNA (
These cytogenetic studies have also played an important role in describing the main features in the systematics and phylogeny of orchids, based on both chromosomal analysis by traditional techniques (
The subtribe Orchidinae Vermeulen, 1977 comprises about 35 genera of mostly terrestrial orchids (
The first systematic study of the karyomorphology of Orchidinae in Europe was undertaken by
Molecular cytogenetic techniques such as fluorescence in situ hybridisation (FISH), used to identify repetitive sequence families and their distribution in plant chromosomes, have proven to be powerful tools for characterising chromosomes and investigating taxonomic relationships in plant groups (
Seeking to increase our knowledge and acquire data on the karyology and systematics of Orchidinae, we used FISH and other techniques to study the karyotypes and heterochromatin distribution of Ophrys tenthredinifera s.l. and three other Orchidinae, i.e. Himantoglossum hircinum (Linnaeus, 1753) Sprengel, 1826, Serapias vomeracea (Burman f., 1770) Briquet, 1910 and Anacamptis morio (Linnaeus, 1753) R.M. Bateman, Pridgeon et M.W. Chase, 1997, specifically their distribution of 18S-5.8S-25S and 5S rDNA loci, in order to elucidate their importance in the plants’ systematics and evolution.
The taxa examined and their collection sites are shown in Table
Taxon | Provenance | Collector |
---|---|---|
Ophrys tenthredinifera subsp. grandiflora | Sicily, Francavilla di Sicilia (Messina); Niscemi (Caltanissetta) | Bartolo et Pulvirenti |
Ophrys tenthredinifera subsp. neglecta | Apulia, Cassano Murge (Bari); Torre Canne (Brindisi), Gargano promontory (Foggia) | D’Emerico et Medagli |
Himantoglossum hircinum | Apulia, Cassano Murge (Bari) | D’Emerico et Medagli |
Serapias vomeracea | Apulia, Adelfia (Bari) | D’Emerico |
Anacamptis morio | Apulia, Cassano Murge (Bari) | D’Emerico |
Immature ovary tissues were pre-treated with 0.3% colchicine at room temperature for 2 h. For Feulgen staining they were fixed for 5 min in 5:1:1:1 (v/v) absolute ethanol, chloroform, glacial acetic acid and formalin. Hydrolysis was performed at 20 °C in 5.5 N HCl for 20 min (
For DAPI (4–6-diamidino-2-phenylindole) staining, ovaries were treated as for C-banding and stained using a buffered DAPI solution (0.6 mg/mL) for 5 min. after which they were rinsed and mounted in 1:1 (v/v) buffer and glycerol. For chromomycin A3 (CMA) staining, slides were stained with 0.5 mg/mL CMA for 1 h and mounted in 1:1 (v/v) McIlvaine’s pH 7.0 buffer–glycerol. For identification of the nucleolus, AgNO3 precipitation was used (
For Ophrys tenthredinifera Willd., 1805, chromosome measurements were performed using the freeware MicroMeasure 3.3 (http://www.colostate.edu/Depts/Biology/MicroMeasure). Chromosome pairs were identified and arranged on the basis of length. The nomenclature used for describing karyotype composition followed
For fluorescence in situ hybridisation, the ribosomal sequences 18S-5.8S-25S (pTa71 - red signals) and 5S (pTa794 - green signals) were used as probes. Clone pTa71 was labelled with rhodamine-4-dUTP by nick translation, while pTa794 was labelled with digoxigenin-11-dUTP using polymerase chain reaction. The former contains a 9kb EcoBl repeat unit of 18S-5.8S-25S rDNA and intergenic spacer regions, isolated from Triticum aestivum Linnaeus, 1753 (
For detection of the digoxigenin-labelled probe, the slides were equilibrated in 4× SSC/0.1% (v/ v) Tween 20 and blocked in 5% (w/v) bovine serum albumin in 4× SSC/0.1% (v/v) Tween 20 for 5 min. Slides were incubated with sheep anti-digoxigenin antibody conjugated with FITC in a moist chamber at 37 °C for 1 h. The slides were washed in 4× SSC/Tween 20 3× 5 min and subsequently counterstained with DAPI prior to observation. They were finally mounted in antifade solution AF1 (Citifluor) and examined with a Leitz epifluorescence microscope with single and triple band pass filters. The resulting images were processed with freeware image-editing software, applying the functions to the whole image.
The chromosomes of the studied species are shown in Figs
Genus Ophrys: Mitotic metaphases in Ophrys tenthredinifera showed the chromosome number 2n = 2x = 36. We analysed two subspecies of O. tenthredinifera, O. tenthredinifera subsp. neglecta (Parlatore, 1860) E.G. Camus, 1908 and O. tenthredinifera subsp. grandiflora (Tenore, 1819) Kreutz, 2004, with the traditional Feulgen method and composed the karyotype. The results are shown in Table
Taxon, chromosome number, formula and morphometric parameters (mean ± SE) in Ophrys tenthredinifera. MCA (Mean Centromeric Asymmetry), CVCL (Coefficient of Variation of Chromosome Length), CVCI (Coefficient of Variation of Centromeric Index). Chromosome abbreviations: m, metacentric; sm, submetacentric.
Taxon | Number of individuals | Chromosome number (2n) | Formula | MCA | CVCL | CVCI |
---|---|---|---|---|---|---|
Ophrys tenthredinifera subsp. grandiflora | 5 | 36 | 32m + 4sm | 12.44 ± 2.59 | 16.83 ± 0.84 | 8.43 ± 1.41 |
O. tenthredinifera subsp. neglecta | 10 | 36 | 32m + 4sm | 13.29 ± 0.11 | 16.56 ± 0.88 | 10.80 ± 0.79 |
A, B Diploid karyotype of Ophrys tenthredinifera subsp neglecta C diploid karyotype of O. tenthredinifera subsp. grandifloraD diploid karyotype of Himantoglossum hircinum.
In O. tenthredinifera, C-banding showed the presence of centromeric heterochromatin, with a pair of chromosomes with a telomeric band. A large number of chromocentres were observed in interphase nuclei (Fig.
Ophrys tenthredinifera A Giemsa C-banding metaphase plate B Giemsa C-banding, interphase nucleus C silver staining, interphase nucleus D silver staining, mitotic metaphase E CMA staining, mitotic metaphase. Arrows indicate NOR sites. Scale bar: 5 µm.
Himantoglossum hircinum A Giemsa C-banding, haploid metaphase n = 18 B silver staining, interphase nucleus.
Genus Serapias: Mitotic metaphases in Serapias vomeracea had 2n = 2x = 36 chromosomes. In situ hybridisation shows that there are three pairs of 18S-5.8S-25S rDNA sites (Fig.
In situ hybridisation applied to chromosomes of orchid species. Blue DAPI staining shows chromosomal DNA (A, D, G, respectively Ophrys tenthredinifera, Serapias vomeracea and Himantoglossum hircinum); red and green signals show sites of hybridisation of 18S-25S rDNA and 5S rDNA respectively (B, E, H, C, F, I). Arrows indicate sites. Ophrys tenthredinifera ( B) three 18S-25S rDNA sites and (C) four 5S rDNA sites. Serapias vomeracea (E) six 18S-25S rDNA sites and (F) four 5S rDNA sites. Himantoglossum hircinum (H) four 18S-25S rDNA sites and (I) four 5S rDNA sites.
Genus Himantoglossum: All specimens of Himantoglossum hircinum had 2n = 2x = 36 chromosomes. The H. hircinum karyotype consists of 28m + 8sm. In H. hircinum a secondary constriction was seen in the short arm of pairs 4, 5 and 7 (Fig.
Genus Anacamptis: In diploid Anacamptis morio (2n = 2x = 36), silver nitrate staining in interphase nuclei counted up to four nucleoli. In this study, in situ hybridisation revealed the location of six 18S-5.8S-25S rDNA sites (Fig.
In situ hybridisation applied to chromosomes of Anacamptis morio. Blue DAPI staining shows chromosomal DNA ( C); red and green signals show sites of hybridisation of 18S-25S rDNA and 5S rDNA respectively (A, D, B, E). Arrows indicate sites. Mitotic metaphase 2n = 2x = 36 with (A) six 18S-25S rDNA sites and (B) two 5S rDNA sites. Mitotic metaphase 2n = 3x = 54 with (D) nine 18S-25S rDNA sites and (E) three 5S rDNA sites. Interestingly, a large number of 18S-5.8S-25S rDNA sites (9) were observed in interphase nuclei (small arrow).
This paper reports the physical locations of rDNA loci on the somatic chromosomes of Ophrys tenthredinifera, Serapias vomeracea and Himantoglossum hircinum for the first time. Our analyses showed 18S-5.8S-25S rDNA sites and 5S rDNA sites in triploid specimens of Anacamptis morio.
The chromosome numbers, karyotype asymmetry and heterochromatin content of spontaneous populations of Ophrys tenthredinifera were determined. Mitotic metaphase plates showed 2n = 2x = 36 chromosomes in all studied populations of O. tenthredinifera, which confirms the karyological stability of this taxon throughout its area of distribution (
Regarding the infraspecific taxonomy of Ophrys tenthredinifera, this study analysed two subspecies, namely O. tenthredinifera subsp. neglecta, endemic to Sardinia and peninsular Italy from Tuscany to Calabria, and O. tenthredinifera subsp. grandiflora, endemic to Sicily and southern Calabria (
Silver nitrate staining in interphase nuclei showed three nucleoli, although some meristematic cells had one large nucleolus.
The 18S-5.8S-25S rRNA genes are normally located on the nucleolus organizing secondary constriction and adjacent heterochromatin, of which the nucleolar organiser region (NOR) is constituted. Whereas 5S rDNA sites are exclusively detected by FISH, they do not form chromosome constrictions in metaphase chromosomes (
The two subspecies O. tenthredinifera subsp. neglecta and O. tenthredinifera subsp. grandiflora may be affected by the epigenetic effects of heterochromatic sequences present on chromosomes. Indeed,
Previous cytological studies in Serapias vomeracea have shown 2n = 2x = 36 chromosomes (
Serapias comprises about 25 species (Delforge 2016), and cytological studies have shown that most of them have 2n = 2x = 36 chromosomes (
Himantoglossum s.l. (including Comperia K. Koch, 1849 and Barlia Parlatore, 1860) is a group of species found in Portugal, Spain and across the Mediterranean region, including North Africa, the Aegean islands, Syria and Turkey, as well as the Crimea, the Caucasus and western and northern Iran (
It is interesting to note that the World Checklist of selected Plant Families (WCSP) reports Barlia robertiana (Loiseleur-Deslongchamps, 1807) Greuter, 1967 as a synonym for Himantoglossum robertianum (Loiseleur-Deslongchamps, 1807) P. Delforge, 1999. Furthermore, in the new classification based on morphological and molecular data (
Comparative investigations of Himantoglossum hircinum and Barlia robertiana show similar karyotype morphologies, with mainly metacentric chromosomes, low asymmetry and little constitutive heterochromatin. H. hircinum was found to have four nucleoli in interphase nuclei. Moreover, in situ hybridisation showed four 18S-5.8S-25S rDNA sites and four 5S rDNA sites. In contrast, double-target in situ hybridisation in Barlia robertiana revealed one pair of chromosomes carrying both the pTa794 and pTa71 signals on opposite arms (
Giemsa C-banding and FISH yielded few data for Himantoglossum hircinum and Barlia robertiana, while for H. adriaticum, on which only the conventional Feulgen method was used, only the karyotype was established. As already mentioned, the asymmetry indices and karyological formulas of Himantoglossum hircinum and Barlia robertiana are so similar that it is hard to clearly distinguish between them. Furthermore, we did not obtain important data with Giemsa C-banding; the few discriminating data are visible only with silver staining and FISH. Therefore, in the future it will be useful to continue with the above analyses in order to obtain clarification regarding the phylogenetic relationships between Barlia robertiana and the other species of the genus Himantoglossum.
In Anacamptis morio, the chromosome number 2n = 2x = 36 is consistent with previous reports (
In this study we report analyses of a triploid individual of Anacamptis morio with chromosome number 2n = 3x = 54 for the first time. The same count has been reported in specimens of A. coriophora (Linnaeus, 1753) R.M. Bateman, Pridgeon et M.W. Chase, 1997, A. laxiflora (Lamarck, 1779) R.M. Bateman, Pridgeon et M.W. Chase, 1997 and A. pyramidalis (Linnaeus, 1753) Richard, 1817 (
Fluorescence in situ hybridisation may authentically substantiate the genome structure and distribution of repetitive DNA families. In this context, our results provide new data on the cytogenetic differences between four genera within the Orchidinae and investigations of other species are expected to yield further insight. Moreover, these data constitute basic knowledge for facilitating the study of taxonomic relationships in other species of this subtribe. Some examples are given below.
In relation to the triploid individuals observed in the genus Anacamptis s.l., it is possible to add some interesting notes about A. pyramidalis, useful for other species where polyploid individuals have been observed. The species A. pyramidalis has 2n = 2x = 36, 54, 72 chromosomes (
Also interesting from the karyological point of view are the Neotinea s.l. group, with 2n = 2x = 42 chromosomes, and the polyploid insular neoendemic N. commutata (Todaro, 1842) R.M. Bateman, 2003 with 2n = 4x = 84 (
The Orchis s.s. group, with a chromosomal number of 2n = 2x = 42, is characterised by small chromosomes and a fairly complex structure. Polyploidy has been observed in Orchis canariensis Lindley, 1835, O. olbiensis Reuter ex Grenier, 1860 and O. patens Desfontaines, 1799, with 2n = 4x = 84 chromosomes (
We thank Giuseppina Bartolo and Santa Pulvirenti for helping us with the collection of O. tenthredinifera subsp grandiflora. Domenico Pignone and Incoronata Galasso for technical analysis as part of the FISH experiments. The reviewers Lorenzo Peruzzi and Quanwen Dou for corrections and suggestions that helped us to improve the early version of the manuscript.
Antonella Albano https://orcid.org/0000-0002-0874-320X
Alessio Turco https://orcid.org/0000-0001-9071-344X
Robert P. Wagensommer https://orcid.org/0000-0002-1614-4821