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Variation of karyotype and nuclear DNA content among four species of Plectranthus L’ Héritier, 1788 (Lamiaceae) from Brazil
expand article infoThaís Furtado Nani, Amanda Teixeira Mesquita§, Fernanda de Oliveira Bustamante, Sandro Barbosa|, João Vítor Calvelli Barbosa|, Lisete Chamma Davide
‡ Federal University of Lavras, Lavras, Brazil
§ University of Campinas, Campinas, Brazil
| Federal University of Alfenas, Alfenas, Brazil
Open Access

Abstract

Plectranthus is a genus which includes species of ornamental and medicinal potential. It faces taxonomic problems due to aggregating species previously belonging to the genus Coleus, a fact that has contributed to the existence of various synonymies. The species Plectranthus amboinicus, Plectranthus barbatus, Plectranthus grandis and Plectranthus neochilus are included in this context. Some authors consider P. barbatus and P. grandis as synonyms. The present work was carried out with the aim of comparing plants of the above-mentioned species, originating from different localities in Brazil, with regards to chromosome number and karyotypic morphology, correlated to the nuclear DNA content. There was no variation in chromosome number among plants of the same species. P. amboinicus was the only species to exhibit 2n=34, whereas the others had 2n=30. No karyotypic differences were found among the plants of each species, except for P. barbatus. The plants of the Plectranthus species revealed little coincidence between chromosome pairs. The nuclear DNA content allowed grouping P. amboinicus and P. neochilus, with the highest mean values, and P. grandis and P. barbatus with the lowest ones. Differences in DNA amount among the plants were identified only for P. barbatus. These results allow the inference that the populations of P. amboinicus and P. neochilus present coincident karyotypes among their plants, and P. grandis is probably a synonym of P. barbatus.

Keywords

Cytogenetics, Cytotaxonomy, Flow cytometry, Karyotypic evolution

Introduction

The family Lamiaceae Martinov, 1820 contains approximately 250 genera and 6,500 species (Anon 2014). Its main area of distribution is the Mediterranean region and Mid-East, up to Central Asia (Chengyih and Hsiwen 1982). In Brazilian territory, 500 species of 34 genera can be found broadly distributed across the country (Harley et al. 2013).

Plectranthus L’ Héritier, 1788 is one of the most common genera of this family, and comprises about 300 species (Richardson 1992) that generally serve medicinal and ornamental interest (Thoppil 1993). Species of this genus are native to tropical and subtropical regions of Africa, Australia, the East Indies, the Malay Archipelago, and the Philipines (Lebowitz 1985).

This genus, along with Burnatastrum Briquet, 1897, Coleus Loureiro, 1790 Englerastrum Briquet, 1894, Isodictyophorus Briquet, 1917 and Neomullera unrecorded, has already been placed in the genus Ocimum Linnaeus, 1753. Coleus and Plectranthus have been considered distinct genera only because of morphological differences of the stamen; however, this characteristic has later been considered insufficient for the separation of these taxa. This way, the Coleus species were aggregated to the genus Plectranthus, turning this grouping into a unique genus and independent of Ocimum Linnaeus, 1753 (Morton 1962). The taxonomic history of Plectranthus has contributed to some of its species being known by many different synonymies (Lukhoba et al. 2006).

In Brazil there are some important species of this genus used as herbal medicines. Plectranthus amboinicus (Loureiro, 1825) Sprengel, 1825 is native to East Asia, later introduced in Cuba and distributed in America (Castillo and Gonzalez 1999). Plectranthus barbatus Andrews, 1810 is native to Africa and it is one of the most cited species in ethnobotanical surveys in Brazil (Carriconde et al. 1996). Plectranthus neochilus Schlecher, 1896 is also native of Africa, later introduced in Brazil (Lorenzi and Matos 2002). P. barbatus and P. grandis (Cramer, 1979) Willemse, 1985 are very similar species and they are usually confused, since they are used for the same medicinal purposes. Pioneering cytogenetic works in this genus have revealed species with diversified chromosome numbers, from 2n=14 to 84, with 2n=28 being most frequent (Morton 1962).

Cytogenetic differences among plants of the same species may reflect in variation in amount, quality and type of secondary metabolites produced by the plant, as observed by Pierre et al. (2011) in plants of Lippia Linnaeus, 1753.

Knowledge of DNA content, along with cytogenetics and molecular genetics, contributes to the genetic characterization of related species. The correct definition of the taxon, associated to biochemical and pharmacological evaluations, is essential for the correct use of plants for medicinal purposes. This preoccupation becomes even more important considering the recognition by the World Health Organization that about 80% of the population in developing countries makes use of plants or preparations thereof as home and communitarian remedies (Brasil 2006).

Considering the variety of chromosome number descriptions and the lack of karyotypic information about Plectranthus species, an enhanced investigation of the chromosome complement is necessary with the purpose of supporting taxonomic studies and evolutionary inferences. In this sense, the present work aimed at the characterization and comparison of the karyotype and DNA content of plants, from distinct localities, of the species P. amboinicus, P. barbatus, P. grandis and P. neochilus.

Material and methods

Plants of P. amboinicus, P. barbatus, P. grandis and P. neochilus from Lavras-MG, Campinas-SP and Santa Maria-RS was cytogenetically compared. In each region three cuttings of a plant of each species were collected from plant clumps. Plants from Minas Gerais State were supplied by Medicinal Plant Garden of the University of Lavras (UFLA), the ones from Rio Grande do Sul State was provided by Medicinal Plant Garden of University of Santa Maria (UFSM) and plants from São Paulo State by the Campinas Agronomy Institute (IAC). Voucher specimens were deposited at the Research Center for Chemistry, Biology and Agriculture (CPQBA), State University of Campinas, and the State University of Campinas Herbarium (UEC), São Paulo, Brazil (Table 1). The cuttings were transplanted into vases and kept in a greenhouse. After root development, the root tips were collected and pre-treated with solution of 3 mM 8-hydroxyquinoline for 4 hours, at 4 °C, and fixed in Carnoy’s solution (3:1 /ethanol:acetic acid). The material was then stored at -20 °C for at least 24 hours.

Voucher specimens numbers of Plectranthus plants collected.

Species Voucher specimens
P. amboinicus CPQBA 364
P. barbatus UEC 121.403
P. grandis CPQBA 1433
P. neochilus CPQBA 1388

Slides were prepared by the squash technique, and chromosomes were stained with 1% acetic orcein after enzymatic maceration in pectinase-cellulase solution (100U:200U) for 15 min, at 37 °C.

Metaphases were digitized by means of a bright field microscope (Leica DMLS) equipped with microcamera (Nikon Digital Sight DS-Fil). The chromosomes were measured using the software Image Tool 3.0 from the UTHSCA (University of Texas Health Science Center in San Antonio).

For assembly of the karyograms and idiograms, at least four mitotic metaphases of each plant collected were used. Measurements of short and long arm length (SA/LA) were carried out for each chromosome pair, as well as of total length for each chromosome (TLi = LA + SA), total length of haploid lot (TLHL = STLi), and relative length (RL = TLi/TLHL × 100).

The data on relative length of chromosome pairs of P. grandis as well as of P. barbatus plants were compared by the least significant difference (LSD) at 5% probability, using the statistical program SAS.

Morphological classification of the chromosomes was based on centromere position, as proposed by Levan et al. (1964). Karyotypic asymmetry was evaluated according to criteria by Zarco (1986) using A1, (intrachromosomal asymmetry) and A2, (interchromosomal asymmetry) indices. These indices were compared to the asymmetry index (AI) proposed by Paszko (2006). Karyotypic categories were determined using the methods proposed by Stebbins (1958).

Estimation of nuclear DNA content by flow cytometry was obtained from leaf tissue according to the work of Doležel and Bartoš (2005). Nine samples of plants from each location were evaluated, total of 27 samples per specie. A total of nine samples of P. grandis was evaluated. Approximately 20-30 mg of young leaves of the Plectranthus species were used per sample, along with the same amount of Pisum sativum Linnaeus, 1753 leaves (internal reference standard, 2C=9.09 pg) (Doležel et al. 1992). The nuclei were released by dissociation of the plant material in Petri dish containing 1 mL of Marie and Brown (1993) cold buffer for yielding the nuclei suspension, to which were added 5 µL of RNase Type I. The suspension was stained with 25 µl of propidium iodide (1 mg/mL). For each sample, at least 10,000 nuclei were analyzed with a flow cytometer FACSCalibur (Becton Dickinson). The histograms with coefficients of variation below 0.8% were obtained using the software Cell Quest (Becton, Dickinson and Company, San Jose, CA, USA), and analyzed with the software WinMDI 2.8 (2009). The absolute DNA amount of the samples was calculated based on the values of the G1 peak means (Sample 2C DNA content = [(sample G1 peak mean)/(standard G1peak mean)] × standard 2C DNA content (pg DNA).

The data on DNA content of plants of each location, as well as the means of each species, were submitted to analysis of variance, and the mean values were compared with help of the statistical program SAS, using Tukey test at 5% probability to compare the plants and species.

Results

No variation was found as to the number of chromosomes among the plants of Plectranthus species. The somatic number of chromosomes was common (2n=30), except for P. amboinicus, which presented 2n=34 chromosomes (Fig. 1).

Figure 1.

Mitotic metaphases. P. amboinicus, 2n=34 (A), P. barbatus (from Lavras-MG), 2n=30 (B), P. grandis, 2n=30 (C), P. neochilus, 2n=30 (D). Scale bars: 10 µm.

Differences were observed in chromosome morphology among the karyotypes of the species. P. amboinicus follows the karyotypic formula 13m+4sm, P. grandis 7m+8sm, and P. neochilus 9m+6sm (Table 2, Fig. 2). P. barbatus presented intraspecific variation: 8m+7sm, 9m+6sm and 10m+5sm, respectively corresponding to the specimens originated from the regions of Lavras/MG, Campinas/SP and Santa Maria/RS (Table 2, Fig. 3).

Figure 2.

Karyograms and idiograms. P. amboinicus (A), P. grandis (B), P. neochilus (C). Scale bars: Karyograms (5 µm); idiograms (1 µm).

Figure 3.

Karyograms and idiograms for P. barbatus from different localities. Lavras (A), Campinas (B), Santa Maria (C). Scale bars: Karyograms (5 µm); idiograms (1 µm).

Data regarding arm relation and chromosome type in species of Plectranthus genus.

P. a P. b P. g P. n
UFLA IAC UFSM
1 1.43m 2.35sm 1.88sm 1.21m 1.34m 1.79sm
2 1.21m 2.15sm 1.18m 1.25m 1.34m 1.17m
3 1.37m 1.42m 1.98sm 1.38m 1.96sm 2.00sm
4 2.35sm 1.44m 1.29m 1.28m 1.20m 2.13sm
5 1.39m 2.07sm 1.88sm 1.79sm 2.02sm 1.13m
6 1.36m 1.32m 1.17m 1.37m 1.18m 1.19m
7 2.19sm 1.32m 1.30m 2.23sm 2.07sm 1.92sm
8 1.27m 2.22sm 1.79sm 1.30m 1.98sm 1.11m
9 1.38m 1.53m 1.97sm 2.22sm 2.27sm 1.81sm
10 1.99sm 2.19sm 1.40m 1.35m 2.15sm 1.25m
11 1.29m 2.25sm 1.38m 1.17m 1.37m 1.26m
12 1.36m 2.01sm 1.41m 2.06sm 2.20sm 1.39m
13 1.29m 1.20m 1.21m 2.27sm 2.04sm 1.43m
14 1.97sm 1.43m 2.11sm 1.47m 1.21m 1.84sm
15 1.17m 1.24m 1.20m 1.21m 1.35m 1.25m
16 1.18m
17 1.24m

The position of the centromere was coincident among the four species only for the pairs 6 and 15, with these being classified as metacentric (Table 2).

Also among the plants of P. barbatus little karyotypic similarity could be established. Only the pairs 4, 5, 6 and 15 had chromosomes with coinciding classification. Moreover, these same pairs are also coincident in P. grandis, which presented greater karyotypic similarity with the plants of P. barbatus (Santa Maria), differing only in the pairs 3, 8 and 10 (Table 2).

The contrasts accomplished through the statistical test of least significant difference (LSD) among the plants revealed that P. barbatus (Campinas) differs statistically from P. grandis in relation to the pairs 2 and 12. The pair 2 presents relative length with mean values of 8.78 and 8.10, and the pair 12 shows 5.45 and 5.92 for P. barbatus and P. grandis, respectively. The pair 8 differed among the plants of P. barbatus originated from Lavras and Santa Maria, with respective averages of 6.68 and 6.93 (Tables 34). The remaining pairs did not present significant differences for this variable among the plants of the species.

Data regarding the total length (µm) and relative length (%) of each chromosome of Plectranthus spp.

Pair P. amboinicus P. barbatus P. grandis P. neochilus
UFLA IAC UFSM
1 3.04 (8.89) 2.99 (8.56) 3.57 (9.42) 2.93 (9.09) 2.95 (8.37) 2.82 (8.55)
2 2.87 (8.38) 2.87 (8.22) 3.33 (8.78) 2.63 (8.15) 2.85 (8.10) 2.75 (8.33)
3 2.49 (7.26) 2.75 (7.87) 3.09 (8.15) 2.52 (7.82) 2.72 (7.72) 2.55 (7.75)
4 2.42 (7.06) 2.60 (7.44) 2.94 (7.75) 2.43 (7.55) 2.65 (7.52) 2.42 (7.34)
5 2.31 (6.73) 2.52 (7.20) 2.80 (7.38) 2.34 (7.26) 2.58 (7.32) 2.41 (7.31)
6 2.13 (6.23) 2.51 (7.17) 2.72 (7.17) 2.27 (7.03) 2.50 (7.09) 2.36 (7.15)
7 2.05 (5.98) 2.44 (6.97) 2.61 (6.89) 2.26 (7.00) 2.37 (6.72) 2.30 (6.97)
8 2.02 (5.90) 2.34 (6.68) 2.59 (6.83) 2.23 (6.93) 2.36 (6.69) 2.25 (6.82)
9 1.94 (5.68) 2.23 (6.37) 2.35 (6.20) 2.10 (6.50) 2.31 (6.57) 2.14 (6.48)
10 1.86 (5.42) 2.18 (6.23) 2.25 (5.95) 2.06 (6.39) 2.18 (6.19) 2.04 (6.19)
11 1.78 (5.20) 2.11 (6.02) 2.23 (5.87) 2.00 (6.21) 2.14 (6.09) 1.97 (5.97)
12 1.72 (5.02) 1.95 (5.58) 2.07 (5.45) 1.84 (5.71) 2.09 (5.92) 1.89 (5.72)
13 1.68 (4.90) 1.94 (5.56) 2.03 (5.35) 1.66 (5.15) 1.95 (5.52) 1.78 (5.39)
14 1.61 (4.70) 1.83 (5.23) 1.78 (4.71) 1.57 (4.88) 1.86 (5.29) 1.74 (5.26)
15 1.57 (4.59) 1.71 (4.89) 1.56 (4.10) 1.40 (4.34) 1.72 (4.89) 1.57 (4.76)
16 1.45 (4.22)
17 1.32 (3.85)

Comparison of relative lengths of the chromosome pairs 2, 8 and 12 of Plectranthus plants by LSD test.

P. b (UFLA) P. b (IAC) P. b (UFSM) P. g (IAC)
P. b (UFLA) - ABC AbC ABC
P. b (IAC) ABC - ABC aBc
P. b (UFSM) AbC ABC - ABC
P. g (IAB) ABC aBc ABC -

According to Stebbins (1958), P. amboinicus and P. barbatus (Campinas and Santa Maria) have karyotypes included in the category 3b. Differently, the karyotypes of P. neochilus, P. grandis and P. barbatus (Lavras) were included in the category 3a.

The studied species of Plectranthus have close karyotypic asymmetry indices (Table 5).

Values of karyotypic asymmetry indices of Plectranthus species, according to criteria proposed by Zarco (1986) (A1: intrachromosomal asymmetry, A2: interchromosomal asymmetry) and proposed by Paszko (2006) (AI: asymmetry index).

P. a P. b P. g P. n
UFLA IAC UFSM
A1 0.29 0.39 0.32 0.32 0.38 0.33
A2 0.23 0.17 0.22 0.19 0.15 0.16
AI 3.09 2.60 2.93 2.82 2.48 2.06

P. amboinicus has the largest difference in relation to total size of the chromosomes, besides having the greatest asymmetry index as proposed by Paszko (2006). P. neochilus has one of the smallest values, both for intrachromosomal (A1) and interchromosomal asymmetry (A2), as proposed by Zarco (1986). It also has the smallest asymmetry index (AI) value as described by Paszko (2006) (Table 5).

In relation to DNA amount in the evaluated Plectranthus plants, two groupings were identified (Table 6): P. amboinicus (5.86 pg) and P. neochilus (5.98 pg) had the highest mean values (Fig. 4a, c), whereas P. grandis (5.23 pg) and P. barbatus (5.35 pg) had the lowest (Fig. 4b, d–f).

Figure 4.

Flow cytometry histograms. P. amboinicus (A), P. grandis (B), P. neochilus (C), P. barbatus (D–F) from UFLA (D), IAC (E), UFSM (F). The first peak in each histogram refers to the G1 peak of each of the Plectranthus species, and the second G1 peak corresponds to the reference sample (Pisum sativum). The abscissa represents the DNA amount, and the ordinate the number of nuclei.

Mean values of 2C DNA and coefficient of variation obtained by flow cytometry technique for Plectranthus plants.

Species/Plant DNA (pg)1 CV (%)
P. amboinicus (UFLA) 5.98 a 0.79
P. amboinicus (IAC 465) 5.79 a 0.72
P. amboinicus (IAC 2193) 5.81 a 0.57
Mean 5.86 A
P. barbatus (UFLA) 5.20 a 0.57
P. barbatus (IAC) 5.17 a 0.70
P. barbatus (UFSM) 5.69 b 0.57
Mean 5.35 B
P. grandis 5.23 B 0.64
P. neochilus (UFLA) 5.99 a 0.56
P. neochilus (IAC) 5.94 a 0.54
P. neochilus (UFSM) 6.00 a 0.55
Mean 5.98 A

Discussion

Distinct chromosome numbers for P. amboinicus have already been described in the literature (2n=16, 24, 30, 32, 34, 48 and 56) in works that treated the species with different synonymies (Scheel 1931, Basavaraja and Krishnappa 1982, Saggoo and Bir 1983, Thoppil 1993).

Thoppil (1993), studying the synonymy Coleus aromaticus Bentham, 1831, found 2n=32 as most common chromosome number and that the relative lengths of the largest and smallest chromosomes were 8.19 and 4.37, respectively. The values of relative length described here, for plants with 34 chromosomes, are slightly similar to those found by Thoppil (1993) (Table 2), suggesting the occurrence of rearrangements of breakage or fusion type in the chromosomes of intermediary size.

Karyotypic studies on P. neochilus are rare in the literature. De Wet (1958) and Riley and Hoff (1961), using the synonymy Coleus pentheri Gürke, 1905 described 32 chromosomes for plants originated from the east and south of Africa. These authors did not report details of chromosome morphology for this species. The occurrence of 30 chromosomes in P. neochilus is reported for the first time in the present work.

The occurrence of 30 chromosomes in P. barbatus that was observed for different accessions of this species in the present study corroborates the number reported earlier by different authors (Cherian and Kuriachan 1981, Sagoo and Bir 1983, Bahl and Tyagi 1988, Thoppil 1993). Other descriptions regarding variation in chromosome number (2n=28 to 34) have been related for P. barbatus (Reddy 1951, Saggoo and Bir 1983). Riley and Hoff (1961) were the first to find a specimen with 32 chromosomes. According to Thoppil (1993), specimens of this species from the south of India with 28 chromosomes, have autotetraploid genome with basic number x=7.

The statistical differences observed for the pairs 2, 8 and 12 in P. barbatus and P. grandis suggest the occurrence of chromosomal rearrangements, seeing that some of these pairs present variation both in relative length as well as in centromeric position. This way, the chromosomes of pairs 8 and 12 classified as submetacentric may have undergone alterations, namely deficiency in one of the chromosome arms, giving rise to the metacentric form, or duplications in one of the arms of these chromosomes, thus rendering them submetacentric. The differences seen in the pair 2 for P. barbatus (Campinas) and P. grandis did not express variations in centromere position, which suggests events of duplication/deficiency in both chromosome arms.

The remaining chromosome pairs of the evaluated P. barbatus and P. grandis plants did not present significant statistical differences regarding relative length. Nevertheless, the centromere position in some of the pairs of P. barbatus plants and of the P. grandis plant appeared altered. Taking the chromosome pair 1 as example, the plants from Lavras and Campinas had it classified as submetacentric, and that from Santa Maria, together with P. grandis, had the same pair classified as metacentric. These changes in classification of the chromosome pair as to centromere position may be justified by the occurrence of inversions, since the relative lengths are statistically similar. Also, other mechanisms may drastically modify the chromosome structure, among which centromeric repositioning, as reported by Rocchi et al. (2012). These authors propose that centromeric repositioning is an alteration that occurs in the chromosome structure without changes in the base sequence of the DNA. This event creates a new centromere (neocentromere), apparently through epigenetic factors, and substitutes the original one. This finding has deeply modified the interpretation of karyotypic evolution in various mammals.

Different pressures exerted by the different environments can be other reason for karyotypic variations mentioned for P. barbatus, since this hypothesis was considered previously by Shah (1989), who evaluated populations of this species from distinct geographical origins and identified variation in the chromosome morphology among plants of this species.

Passinho et al. (1999) and Bandeira et al. (2010) also evaluated different populations of Plectranthus species by means of AFLP (Amplified Fragment Length Polymorphism) and RAPD (Random Amplified Polymorphic DNA), respectively, and according to these authors there are intra and interpopulational genetic variation.

The occurrence of differentiated karyotypic formulas for plants of P. barbatus and the fact that P. barbatus presents nuclear DNA content statistically similar to that of P. grandis, are not able to indicate that P. barbatus and P. grandis have enough differences to be considered distinct species. Therefore, more experiments using molecular cytogenetic techniques are needed in order to understand the relationship between both species.

Regarding to asymmetry of karyotype, based on the methods of Stebbins (1958), P. amboinicus is included in a more asymmetric category in relation to the other studied species. According to Stebbins (1958), the karyotypic symmetry is characterized by the predominance of metacentric and submetacentric chromosomes of approximately same size. Nonetheless, this species presents the largest proportion between the smallest and largest chromosome, thus being interchromosomally more asymmetrical.

Based on asymmetry indexes proposed by Zarco (1986) and Paszko (2006), P. amboinicus also exhibited the most asymmetric karyotype, as it presented the highest AI value (Table 5). According to Paszko (2006), high values are indicative of more elevated levels of karyotypic heterogeneity. P. neochilus can be considered the species with lowest asymmetry in relation to the others, both from the intrachromosomal as well as interchromosomal point of view, due to presenting the lowest coefficients of variation for centromeric index and total chromosome length; these data consequently generate a value inferior to AI (Table 5). Both species are the most distant ones in terms of karyotypic asymmetry. These species have probably undergone structural rearrangements of karyotype, without great losses or gains of DNA sequences, as both have statistically similar amounts of nuclear DNA. Even though the dispersion diagram may indicate different degrees of asymmetry, the studied Plectranthus species are strictly related, which can be observed by the gradual variations in AI values (Table 5).

The variation among karyotypes of kindred species and among plants, associated with the differences in nuclear DNA content found in this work, supports the hypothesis that, karyotypically, P. amboinicus and P. neochilus are more stable species and the variation found among plants of P. barbatus, regarding chromosome morphology, express differences among populations.

Conclusions

The populations of P. amboinicus and P. neochilus present coinciding karyotypes among their respective plants.

P. barbatus is a species undergoing active process of karyotypic variation.

The karyotypic intraspecific variation in P. barbatus is an indication that P. grandis is one of the events of variation in the species, since the species exhibit the same morphological characteristics.

Acknowledgments

The authors thank the Fundação de Amparo à Pesquisa (FAPEMIG) for financial support; to Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES) for granting of the scholarship; to Dr. Glyn Mara Figueira of the Instituto Agronômico de Campinas (IAC), Dr. José Eduardo Brasil Pereira Pinto of the Universidade Federal de Lavras (UFLA), to Dr. Thais Scotti do Canto-Dorow of Universidade Fedral de Santa Maria (UFSM) for supplying plant material; and to Dr. Moacir Pasqual of the Laboratory of Tissue Culture of the UFLA for support in the cytometric analyses.

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